Finding Your Inner Modeler: An NSF Workshop – Year 3

Program

View the program in printable PDF
Day 1: June 13, 2019 (Thursday)
8:30-9:00 Registration
9:00-9:10 Welcome and meeting overview: David Stone (UIC) & Elizabeth Sztul(UAB)
9:10 - 9:50 Project Presentation 1:
Dan Szymanski and Joe Turner (Purdue)
Mechanical modeling of epidermal morphogenesis with integrated experimental verification (PDF, 19.1MB)
9:50 - 10:30 Project Presentation 2:
Gregor Neuert (Vanderbilt)
Predictive understanding of cell biological systems through kinetic analysis (PDF, 11Mb)
10:30 - 11:10 Project Presentation 3:
Matthias Falk and Wonpil Im (Lehigh)
Modeling Gap Junctions and Direct Cell-to-Cell Communication: A few examples (PDF, 4.5Mb)
11:10 - 11:30 Coffee break
11:30 - 12:30 Keynote Talk 1:
Julien Berro (Yale)
"Essentially all models are wrong, but some are useful" (PPT, 53.8MB)
12:30 - 1:10 NSF MCB Program Officer:
Rita Miller (NSF)
Funding opportunities at NSF-MCB for biological modeling
1:10 - 2:30 Catered lunch
2:30 - 3:10 Community modeling:
Anne Cowan (U Conn)
VCell and the potential of community modeling (PPT, 8.8MB)
3:10 - 4:00 Project Presentation 4:
Shahid Mukhtar (UAB)
Rescheduled for 2:00 pm, June 14
4:00 - 5:30 Poster Session (abstract)
5:30 - ? Happy hour mixer
Day 2: June 14, 2019 (Friday)
9:00-9:40 Project Presentation 5:
Belinda Akba and Marcela Rojas-Pierce (NCSU)
Qualitative-to-quantitative modeling directs experimental inquiry: uncovering mechanisms of membrane fusion in plants
9:20-10:20 Project Presentation 6:
Wouter Jan Rappel (UCSD)
Computational modeling of Eukaryotic cell migration inspired by experiments (PPT, 37.9MB)
10:20-11:00 Project Presentation 7:
Lynn Dobrunz (UAB)
Use of Mathematical Modeling to Investigate Mechanisms Regulating Neurotransmitter Release
11:00 - 11:20 Coffee break
11:20 - 12:20 Keynote Talk 2:
Wonpil Im (Lehigh)
Biomolecular Modeling and Simulation using CHARMM-GUI (PPT, 704MB)
12:20 - 12:50 Match website:
David Stone (UIC) and Michael Blinov (UCHS)
Matching computational and modeling expertise among biologists (PPT, 374KB)
12:50 - 2:00 Catered lunch
2:00 - 2:40 Project Presentation 4:
Shahid Mukhtar (UAB)
Getting to the Edge of Diverse Biological Networks
2:40 - 3:40 Panel Discussion/Town Hall Szymansky, Neuert, Im, Lopez, Rappel, Berro, Blinov, Mukhtar, Stone, Turner, Cowan, Akpa
3:40 - 5:40 Meet a Modeler 30 minute consultation sessions: (reservation)
Cowan, Rappel, Mukhtar, Im, Neuert, Berro, Blinov, et al
5:40 Closing remarks: David Stone(UIC), Carlos Lopez(Vanderbilt), & Elizabeth Sztul (UAB)
5:50 Depart for the airport or a vacation in the “Heart of Dixie”